BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013C08LP1|AL426495
(804 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1272 1550 0.0
>3x_Contig1272
Length = 8315
Score = 1550 bits (780), Expect = 0.0
Identities = 799/805 (99%), Gaps = 3/805 (0%)
Strand = Plus / Plus
Query: 1 gatcagacgtcgttggtttcttagccaagacaaactttgggccttcaacattaacggctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4141 gatcagacgtcgttggtttcttagccaagacaaactttgggccttcaacattaacggctg 4200
Query: 61 gtttttcctcttcagaatcactatcgctgttaatctcaatttgttcttttttatcttgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4201 gtttttcctcttcagaatcactatcgctgttaatctcaatttgttcttttttatcttgca 4260
Query: 121 gtctctcttccgttacggtcgttgtcggtttagtcacctccgaag-tagagcaaatgatg 179
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 4261 gtctctcttccgttacggtcgttgtcggtttagtcacctccgaaggtagagcaaatgatg 4320
Query: 180 gtgctgcgctaggctttgcgaatgcmaatggatttttaggtttctccacatttgctgatg 239
||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 4321 gtg--gcgctaggctttgcgaatgcaaatggatttttaggtttctccacatttgctgatg 4378
Query: 240 tggtaccaaatgtgaatgagcyagttggaggagcgtttgcagcgccattagttttcgctt 299
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 4379 tggtaccaaatgtgaatgagctagttggaggagcgtttgcagcgccattagttttcgctt 4438
Query: 300 ctgaccttaactgttgcgaataggtcttgtatttatcgaacaggaaagaaatatcagcma 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 4439 ctgaccttaactgttgcgaataggtcttgtatttatcgaacaggaaagaaatatcagcaa 4498
Query: 360 ctggatctgattccaatgtagaatttattttatttttgaattgcacgttcaatgccgtga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4499 ctggatctgattccaatgtagaatttattttatttttgaattgcacgttcaatgccgtga 4558
Query: 420 gtttttcgtttaagtcagtgccttgaggtttcttgtcatcctttatcactttgaacatgt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4559 gtttttcgtttaagtcagtgccttgaggtttcttgtcatcctttatcactttgaacatgt 4618
Query: 480 taggtttatcacccgcagtaaatcctcccattttcctctttggcattgcaatttttctgg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4619 taggtttatcacccgcagtaaatcctcccattttcctctttggcattgcaatttttctgg 4678
Query: 540 tactcattacagattcgctggcaacggcaggtttatcaaatggagtctcgtcatctgaaa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4679 tactcattacagattcgctggcaacggcaggtttatcaaatggagtctcgtcatctgaaa 4738
Query: 600 cattattactatgtccgttctcaagaccttctctggtcatctgagaacccgcaaatctct 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4739 cattattactatgtccgttctcaagaccttctctggtcatctgagaacccgcaaatctct 4798
Query: 660 ttgacatatcctacagtgagtattgtgcttggaaagatcagctcaagagaagtcactttc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4799 ttgacatatcctacagtgagtattgtgcttggaaagatcagctcaagagaagtcactttc 4858
Query: 720 ttaatcagaaacgaattgaactaacgggaagcaaccggaagtagcagaaaaggagtttaa 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4859 ttaatcagaaacgaattgaactaacgggaagcaaccggaagtagcagaaaaggagtttaa 4918
Query: 780 ggattgctgatgtgtaagcattcag 804
|||||||||||||||||||||||||
Sbjct: 4919 ggattgctgatgtgtaagcattcag 4943
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5915
Number of Sequences: 1807
Number of extensions: 5915
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 804
length of database: 10,358,551
effective HSP length: 16
effective length of query: 788
effective length of database: 10,329,639
effective search space: 8139755532
effective search space used: 8139755532
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)